SMTL ID : 5a10.1

The crystal structure of Ta-TFP, a thiocyanate-forming protein involved in glucosinolate breakdown (space group C2)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.42 Å

Oligo State

homo-dimer

Ligands

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 6 residues within 4Å: Chain A: F.138, V.154, R.165, G.193, M.194, F.210 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.138 Hydrogen bonds: A:G.193 Salt bridges: A:R.165 ACT.3: 6 residues within 4Å: Chain B: F.138, V.154, R.165, G.193, M.194, F.210 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:F.138 Hydrogen bonds: B:G.193 Salt bridges: B:R.165

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: D.41, N.66 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.66 Water bridges: A:D.41, A:K.42 NA.4: 2 residues within 4Å: Chain B: D.41, N.66 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:D.41, B:N.66 Water bridges: B:D.41, B:K.42

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gumz, F. et al., The Crystal Structure of the Thiocyanate-Forming Protein from Thlaspi Arvense, a Kelch Protein Involved in Glucosinolate Breakdown. Plant Mol.Biol. (2015)

Release Date

2015-08-26

Peptides

THIOCYANATE FORMING PROTEIN: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

THIOCYANATE FORMING PROTEIN

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