SMTL ID : 5a5i.1

Cytochrome 2C9 P450 inhibitor complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x XI1: N-[4-(3-chloranyl-4-cyano-phenoxy)cyclohexyl]-1,1,1-tris(fluoranyl)methanesulfonamide(Non-covalent)

XI1.1: 14 residues within 4Å: Chain A: R.91, N.187, I.188, L.191, L.216, V.220, M.223, V.275, G.279, A.280, T.284, L.345, L.349 Ligands: HEM.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.188, A:A.280 Hydrogen bonds: A:R.91, A:R.91, A:N.187, A:T.284

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.2: 24 residues within 4Å: Chain A: R.80, I.95, V.96, W.103, L.277, A.280, G.281, T.284, T.285, T.288, Q.339, L.345, S.348, L.349, H.351, P.410, F.411, S.412, R.416, C.418, V.419, G.420, A.424 Ligands: XI1.1 17 PLIP interactions: 16 interactions with chain A, 1 Ligand-Water interactions, Hydrophobic interactions: A:I.95, A:V.96, A:L.277, A:L.345, A:F.411, A:F.411, A:V.419 Hydrogen bonds: A:S.348, A:S.412 Water bridges: A:R.107, A:K.415 Salt bridges: A:R.80, A:R.80, A:H.351, A:R.416 Metal complexes: A:C.418, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Skerratt, S.E. et al., Discovery of a Novel Binding Pocket for Cyp 2C9 Inhibitors: Crystallography, Pharmacophore Modelling and Inhibitor Sar. Med.Chem.Comm. (2016)

Release Date

2016-08-24

Peptides

CYTOCHROME P450 2C9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CYTOCHROME P450 2C9

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