SMTL ID : 5a5j.1

Cytochrome 2C9 P450 inhibitor complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 26 residues within 4Å: Chain A: R.80, I.95, V.96, W.103, R.107, I.161, A.280, G.281, T.284, T.285, T.288, Q.339, L.344, S.348, L.349, H.351, L.374, P.410, F.411, S.412, R.416, C.418, V.419, G.420, L.423, A.424 19 PLIP interactions: 19 interactions with chain A, Hydrophobic interactions: A:I.95, A:V.96, A:I.161, A:A.280, A:L.344, A:L.349, A:L.374, A:F.411, A:F.411, A:V.419, A:L.423, A:A.424 Hydrogen bonds: A:S.348, A:S.412 Salt bridges: A:R.80, A:R.80, A:H.351, A:R.416 Metal complexes: A:C.418

1 x 6YF: N-[4-(3-chloranyl-4-cyano-phenoxy)-3,5-dimethoxy-phenyl]-1,1,1-tris(fluoranyl)methanesulfonamide(Non-covalent)

6YF.2: 17 residues within 4Å: Chain A: R.91, F.97, L.184, N.187, I.188, L.191, S.192, V.220, G.279, A.280, E.283, T.284, T.287, N.457, F.459, A.460, V.462 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.188, A:L.191, A:E.283, A:E.283, A:T.284 Hydrogen bonds: A:N.187, A:S.192, A:N.457 pi-Stacking: A:F.459

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Skerratt, S.E. et al., Discovery of a Novel Binding Pocket for Cyp 2C9 Inhibitors: Crystallography, Pharmacophore Modelling and Inhibitor Sar. To be Published

Release Date

2016-08-03

Peptides

CYTOCHROME P450 2C9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CYTOCHROME P450 2C9

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