SMTL ID : 5a5s.1

NN-TERMINAL BROMODOMAIN OF HUMAN BRD4 WITH 5-5-methoxypyridin-3-yl-3- methyl-8-piperidin-4-ylamino-1,2-dihydro-1,7-naphthyridin-2-one

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.36 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: I.59, I.60, K.61, T.62, N.94 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:I.59, A:K.61, A:T.62, A:T.62, A:T.62

1 x NP8: 5-(5-METHOXYPYRIDIN-3-YL)-3-METHYL-8-[(PIPERIDIN-4-YL)AMINO]-1,2-DIHYDRO-1,7-NAPHTHYRIDIN-2-ONE(Non-covalent)

NP8.2: 10 residues within 4Å: Chain A: W.40, P.41, F.42, Q.44, V.46, L.51, L.53, N.99, D.103, I.105 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:P.41, A:F.42, A:V.46, A:L.51, A:L.51, A:L.53, A:I.105, A:I.105 Hydrogen bonds: A:Q.44, A:N.99, A:N.99, A:D.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Demont, E.H. et al., Fragment-Based Discovery of Low-Micromolar Atad2 Bromodomain Inhibitors. J.Med.Chem. (2015)

Release Date

2015-07-22

Peptides

BROMODOMAIN-CONTAINING PROTEIN 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

BROMODOMAIN-CONTAINING PROTEIN 4

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