SMTL ID : 5a74.1

Crystal structure of the homing endonuclease I-CvuI in complex with its target (Sro1.3) in the presence of 2 mM Mn

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

3 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 6 residues within 4Å: Chain A: A.21 Chain B: D.22, Q.49 Chain D: C.14 Chain E: G.1 Ligands: MN.3 3 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: B:D.22, A:A.21, H2O.1 MN.2: 7 residues within 4Å: Chain A: D.22, Q.49 Chain B: A.21 Chain C: A.13, C.14 Chain F: G.1 Ligands: MN.3 3 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: B:A.21, A:D.22, H2O.1 MN.3: 8 residues within 4Å: Chain A: D.22 Chain B: D.22 Chain C: C.14 Chain D: C.14 Chain E: G.1 Chain F: G.1 Ligands: MN.1, MN.2 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Metal complexes: B:D.22, A:D.22

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Molina, R. et al., Crystal Structure of the Homing Endonuclease I-Cvui Provides a New Template for Genome Modification. J.Biol.Chem. (2015)

Release Date

2015-09-23

Peptides

DNA ENDONUCLEASE I-CVUI: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DNA ENDONUCLEASE I-CVUI

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