SMTL ID : 5a7v.2 (1 other biounit)

The GH130 family of mannoside phosphorylases contains glycoside hydrolases that target beta-1,2 mannosidic linkages in Candida mannan

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

1 x BMA: beta-D-mannopyranose(Non-covalent)

BMA.1: 9 residues within 4Å: Chain A: R.93, I.102, G.103, E.145, W.164, P.169, K.203 Ligands: MAN.2, MAN.3 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:R.93, A:R.93, A:K.203 Water bridges: A:E.95, A:S.107, A:T.162, A:K.203, A:E.231 Salt bridges: A:K.203

2 x MAN: alpha-D-mannopyranose(Non-covalent)

MAN.2: 10 residues within 4Å: Chain A: R.93, I.102, G.103, E.145, T.162, W.164, P.169, K.203 Ligands: BMA.1, MAN.3 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.93, A:R.93, A:K.203 Water bridges: A:E.95, A:T.162, A:K.203, A:E.231 Salt bridges: A:K.203 MAN.3: 13 residues within 4Å: Chain A: N.78, R.93, D.146, K.203, E.231, L.270, E.272, Y.306, Y.342, F.348, D.367 Ligands: BMA.1, MAN.2 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:N.78, A:N.78, A:R.93, A:D.146, A:K.203, A:E.272, A:E.272 Water bridges: A:E.272, A:Y.306, A:T.346 Salt bridges: A:K.203

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 1 residues within 4Å: Chain A: Y.68 6 PLIP interactions: 6 interactions with chain A Water bridges: A:K.59, A:K.59, A:K.59, A:K.59, A:K.59 Salt bridges: A:K.59 SO4.5: 4 residues within 4Å: Chain A: V.51, I.52, S.53, R.122 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.53 Water bridges: A:V.51 Salt bridges: A:R.122 SO4.6: 3 residues within 4Å: Chain A: V.100, G.101, R.105 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:G.101 Water bridges: A:N.74, A:R.105, A:R.105, A:R.105, A:R.105, A:R.105, A:Q.341 Salt bridges: A:R.105 SO4.7: 5 residues within 4Å: Chain A: N.165, H.167, I.168, R.170, N.199 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.165 Water bridges: A:N.199 Salt bridges: A:H.167, A:R.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cuskin, F. et al., The Gh130 Family of Mannoside Phosphorylases Contains Glycoside Hydrolases that Target Beta-1,2 Mannosidic Linkages in Candida Mannan. J.Biol.Chem. (2015)

Release Date

2015-08-26

Peptides

PUTATIVE GLYCOSIDASE PH117-RELATED: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

PUTATIVE GLYCOSIDASE PH117-RELATED