SMTL ID : 5aav.1

Optimization of a novel binding motif to to (E)-3-(3,5-difluoro-4-((1R,3R)-2-(2-fluoro-2-methylpropyl)-3-methyl-2,3,4,9-tetrahydro-1H- pyrido(3,4-b)indol-1-yl)phenyl)acrylic acid (AZD9496), a potent and orally bioavailable selective estrogen receptor downregulator and antagonist

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

hetero-1-1-mer

Ligands

2 x GW5: (2E)-3-{4-[(1E)-1,2-DIPHENYLBUT-1-ENYL]PHENYL}ACRYLIC ACID(Non-covalent)

GW5.1: 20 residues within 4Å: Chain A: L.44, T.45, L.47, A.48, D.49, E.51, W.81, L.82, L.85, M.86, L.89, F.102, M.119, I.122, L.126, G.219, L.223, V.231, V.232, P.233 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.44, A:T.45, A:L.47, A:A.48, A:A.48, A:W.81, A:L.82, A:L.85, A:L.85, A:L.89, A:F.102, A:I.122, A:L.126, A:L.223, A:L.223 Hydrogen bonds: A:D.49 GW5.2: 15 residues within 4Å: Chain B: M.41, L.44, T.45, L.47, A.48, E.51, W.81, L.82, L.85, M.86, F.102, M.119, L.126, G.219, L.223 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:T.45, B:L.47, B:A.48, B:W.81, B:L.82, B:L.85, B:F.102, B:L.126, B:L.223, B:L.223

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

De Savi, C. et al., Optimization of a Novel Binding Motif to (E)-3-(3,5-Difluoro-4-((1R,3R)-2-(2-Fluoro-2-Methylpropyl)-3-Methyl-2, 3,4,9-Tetrahydro-1H-Pyrido[3,4-B]Indol-1-Yl)Phenyl)Acrylic Acid (Azd9496), a Potent and Orally Bioavailable Selective Estrogen Receptor Downregulator and Antagonist. J.Med.Chem. (2015)

Release Date

2015-10-14

Peptides

ESTROGEN RECEPTOR: A
ESTROGEN RECEPTOR: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ESTROGEN RECEPTOR

ESTROGEN RECEPTOR

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