SMTL ID : 5ag9.2 (1 other biounit)

CRYSTAL STRUCTURE OF A MUTANT (665sXa) C-TERMINAL DOMAIN OF RGPB

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.11 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: K.85, V.86, E.87, G.88, R.147, A.149, T.154 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.88, A:T.154 Water bridges: A:K.85, A:R.147 Salt bridges: A:K.85, A:R.147 SO4.2: 2 residues within 4Å: Chain A: A.15, K.82 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.82 SO4.3: 3 residues within 4Å: Chain A: P.14, A.15, N.16 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.15, A:N.16, A:N.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

de Diego, I. et al., The outer-membrane export signal of Porphyromonas gingivalis type IX secretion system (T9SS) is a conserved C-terminal beta-sandwich domain. Sci Rep (2016)

Release Date

2016-04-06

Peptides

Gingipain R2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Gingipain R2

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