SMTL ID : 5ags.1

Crystal structure of the LeuRS editing domain of Mycobacterium tuberculosis in complex with the adduct 3-(Aminomethyl)-4-bromo-7-ethoxybenzo[c][1,2]oxaborol-1(3H)-ol-AMP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.47 Å

Oligo State

monomer

Ligands

1 x MET: METHIONINE(Non-functional Binders)

MET.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x 38Y: 3-(AMINOMETHYL)-4-BROMO-7-ETHOXYBENZO[C][1,2]OXABOROL-1(3H)-OL-MODIFIED ADENOSINE(Non-covalent)

38Y.2: 16 residues within 4Å: Chain A: F.54, T.55, T.56, R.57, T.60, Y.149, V.150, L.151, Y.154, I.159, M.160, V.162, H.165, D.166, R.168, D.169 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:R.57, A:R.57, A:D.166 Hydrogen bonds: A:T.55, A:T.56, A:T.56, A:L.151, A:L.151, A:D.166, A:R.168, A:R.168, A:D.169 Water bridges: A:Y.154, A:Y.154, A:T.156, A:G.157

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Palencia, A. et al., Discovery of Novel Oral Protein Synthesis Inhibitors of Mycobacterium Tuberculosis that Target Leucyl-tRNA Synthetase. Antimicrob.Agents Chemother. (2016)

Release Date

2016-03-09

Peptides

LEUCYL-TRNA SYNTHETASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

LEUCYL-TRNA SYNTHETASE

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