SMTL ID : 5ajt.2 (1 other biounit)

Crystal structure of ligand-free phosphoribohydrolase lonely guy from Claviceps purpurea

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.43 Å

Oligo State

homo-dimer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 2 residues within 4Å: Chain A: E.270, Q.274 No protein-ligand interaction detected (PLIP) EDO.3: 2 residues within 4Å: Chain B: E.270, R.273 No protein-ligand interaction detected (PLIP)

3 x TAR: D(-)-TARTARIC ACID(Non-covalent)

TAR.2: 8 residues within 4Å: Chain A: G.67, S.68, S.69, G.188, G.190, T.191 Chain B: Q.203, F.235 7 PLIP interactions: 6 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:S.68, A:S.68, A:S.69, A:G.188, A:G.190, B:Q.203 Water bridges: A:Y.189 TAR.4: 8 residues within 4Å: Chain A: F.235 Chain B: C.66, G.67, S.68, S.69, G.188, G.190, T.191 7 PLIP interactions: 5 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:S.68, B:S.68, B:S.69, B:G.188, B:G.190, A:Q.203, A:F.235 TAR.5: 3 residues within 4Å: Chain B: T.208, K.261, V.262 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:V.262

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dzurova, L. et al., The three-dimensional structure of "Lonely Guy" from Claviceps purpurea provides insights into the phosphoribohydrolase function of Rossmann fold-containing lysine decarboxylase-like proteins. Proteins (2015)

Release Date

2015-06-03

Peptides

PHOSPHORIBOHYDROLASE LONELY GUY: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

PHOSPHORIBOHYDROLASE LONELY GUY

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