SMTL ID : 5anl.1

Crystal structure of VPS34 in complex with (2S)-8-((3R)-3- Methylmorpholin-4-yl)-1-(3-methyl-2-oxo- butyl)-2-(trifluoromethyl)-3, 4-dihydro-2H-pyrimido(1,2-a)pyrimidin-6- one, processed with the CrystalDirect automated mounting and cryo-cooling technology

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x RBQ: (8S)-2-(morpholin-4-yl)-9-[2-(propan-2-yloxy)ethyl]-8-(trifluoromethyl)-6,7,8,9-tetrahydro-4H-pyrimido[1,2-a]pyrimidin-4-one(Non-covalent)

RBQ.1: 14 residues within 4Å: Chain A: F.334, S.336, P.340, I.356, K.358, Y.392, M.404, Q.405, F.406, I.407, P.411, L.472, I.482, D.483 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:P.411, A:I.482 Hydrogen bonds: A:I.407, A:D.483

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zander, U. et al., Automated Harvesting and Processing of Protein Crystals Through Laser Photoablation. Acta Crystallogr.,Sect.D (2016)

Release Date

2016-04-13

Peptides

PHOSPHATIDYLINOSITOL 3-KINASE CATALYTIC SUBUNIT TYPE 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PHOSPHATIDYLINOSITOL 3-KINASE CATALYTIC SUBUNIT TYPE 3

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