SMTL ID : 5anm.2 (1 other biounit)

Crystal structure of IgE Fc in complex with a neutralizing antibody

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

hetero-2-2-2-mer

Ligands

1 x NAG- NAG- BMA- MAN- MAN- MAN: alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN-MAN.1: 12 residues within 4Å: Chain B: E.1, Y.32, M.100, Y.110 Chain C: Y.14, L.34, V.36, Q.67, N.69, T.71, T.73 Chain E: I.28 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:Y.14

1 x NAG- NAG- BMA- BMA- MAN: beta-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-BMA-MAN.2: 10 residues within 4Å: Chain B: D.77 Chain D: Y.14, L.34, L.38, N.69, T.71, T.73 Chain E: Y.32, M.100, Y.110 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain D Hydrogen bonds: B:D.77 Hydrophobic interactions: D:T.73

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cohen, E.S. et al., A Novel Ige-Neutralizing Antibody for the Treatment of Severe Uncontrolled Asthma. Mabs (2015)

Release Date

2015-09-30

Peptides

IMMUNOGLOBULIN G: AF
IMMUNOGLOBULIN G: BE
IG EPSILON CHAIN C REGION: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

F
L

B
D

E
H

C
E

D
F

IMMUNOGLOBULIN G

IMMUNOGLOBULIN G

IG EPSILON CHAIN C REGION

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