SMTL ID : 5aot.1

Very high resolution structure of a novel carbohydrate binding module from Ruminococcus flavefaciens FD-1 endoglucanase Cel5A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.02 Å

Oligo State

monomer

Ligands

1 x CAC: CACODYLATE ION(Non-covalent)

CAC.1: 4 residues within 4Å: Chain A: H.101, H.102, H.103, H.104 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.102, A:H.103, A:H.104

5 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: N.24, E.67, P.69 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.24, A:N.24, A:E.67 GOL.3: 4 residues within 4Å: Chain A: W.54, E.55, V.66, E.67 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.55, A:E.67 Water bridges: A:E.53, A:E.55 GOL.4: 3 residues within 4Å: Chain A: W.85, W.86, H.87 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.87 Water bridges: A:H.87, A:S.88 GOL.5: 4 residues within 4Å: Chain A: S.71, K.72, I.73, P.74 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.71, A:K.72 Water bridges: A:A.75 GOL.6: 3 residues within 4Å: Chain A: E.6, W.49, E.81 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Venditto, I. et al., Complexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition. Proc. Natl. Acad. Sci. U.S.A. (2016)

Release Date

2016-06-22

Peptides

Carbohydrate binding module: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbohydrate binding module

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