SMTL ID : 5apg.3 (2 other biounits)

Structure of the SAM-dependent rRNA:acp-transferase Tsr3 from Vulcanisaeta distributa

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x EEM: [(3S)-3-AMINO-4-HYDROXY-4-OXO-BUTYL]-[[(2S,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL]-METHYL-SELANIUM(Non-covalent)

EEM.1: 20 residues within 4Å: Chain A: N.18, T.19, L.45, D.46, P.47, L.68, I.69, D.70, C.71, S.72, W.73, A.76, H.80, R.92, L.93, Y.108, L.110, S.111, T.112, A.115 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:K.17, A:T.19, A:I.69, A:H.80, A:L.93, A:Y.108, A:L.110, A:T.112 Water bridges: A:N.18, A:N.18, A:N.18

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Entian, K.-D. et al., Ribosome Biogenesis Factor Tsr3 is the Aminocarboxypropyl Transferase Responsible for 18S Rrna Hypermodification in Yeast and Humans. Nucleic Acids Res. (2016)

Release Date

2016-04-27

Peptides

TSR3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

TSR3

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