SMTL ID : 5ar5.1

RIP2 Kinase Catalytic Domain (1 - 310) complex with Benzimidazole

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.66 Å

Oligo State

homo-dimer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 1 residues within 4Å: Chain A: E.128 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:E.128, H2O.3, H2O.3, H2O.3, H2O.6

2 x IQ7: 2-(2-(4-CHLOROPHENYL)-1H-IMIDAZOL-5-YL)-N,1-BIS(2-METHOXYETHYL)-1H-BENZO[D]IMIDAZOLE-5-CARBOXAMIDE(Non-covalent)

IQ7.2: 18 residues within 4Å: Chain A: R.38, Y.39, L.40, S.41, V.48, A.61, K.63, L.86, L.95, I.109, T.111, E.112, Y.113, M.114, G.117, L.169, A.179, D.180 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.40, A:V.48, A:K.63, A:K.63, A:L.95, A:T.111, A:L.169, A:A.179 Hydrogen bonds: A:L.40, A:S.41, A:M.114 IQ7.3: 16 residues within 4Å: Chain B: Y.39, L.40, S.41, V.48, A.61, K.63, L.86, L.95, I.109, T.111, E.112, Y.113, M.114, L.169, A.179, D.180 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:L.40, B:V.48, B:K.63, B:K.63, B:L.95, B:A.179 Hydrogen bonds: B:L.40, B:S.41, B:M.114

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Charnley, A.K. et al., Crystal Structures of Human Rip2 Kinase Catalytic Domain Complexed with ATP-Competitive Inhibitors: Foundations for Understanding Inhibitor Selectivity. Bioorg.Med.Chem. (2015)

Release Date

2015-10-21

Peptides

RECEPTOR-INTERACTING SERINE/THREONINE-PROTEIN KINASE 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

RECEPTOR-INTERACTING SERINE/THREONINE-PROTEIN KINASE 2

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