SMTL ID : 5axi.2 (2 other biounits)

Crystal structure of Cbl-b TKB domain in complex with Cblin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x ASP- GLY- PTR- MET- PRO: Cblin(Non-covalent)

ASP-GLY-PTR-MET-PRO.1: 12 residues within 4Å: Chain A: Y.230, K.234, R.250, S.252, C.253, T.254, R.255, A.260, L.271, Q.272, T.273, I.274 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.230, A:A.260, A:Q.272, A:I.274 Hydrogen bonds: A:Y.230, A:C.253, A:T.254, A:T.254, A:R.255, A:Q.272 Water bridges: A:R.250 Salt bridges: A:K.234, A:R.250

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: D.185, T.187, N.189, Y.191, E.196 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.185, A:T.187, A:Y.191, A:E.196, A:E.196

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: K.139, Q.205, P.206, W.207 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ohno, A. et al., Structural analysis of the TKB domain of ubiquitin ligase Cbl-b complexed with its small inhibitory peptide, Cblin. Arch.Biochem.Biophys. (2016)

Release Date

2016-03-02

Peptides

E3 ubiquitin-protein ligase CBL-B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

E3 ubiquitin-protein ligase CBL-B

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