SMTL ID : 5b1c.1 (1 other biounit)

Crystal structure of DEN4 ED3 mutant with L387I

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: V.55, G.56, R.57, I.58 Chain B: K.53 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:G.56, A:R.57, A:I.58 Salt bridges: B:K.53 SO4.2: 3 residues within 4Å: Chain A: R.47, K.53 Chain B: T.62 7 PLIP interactions: 5 interactions with chain A, 2 interactions with chain B Water bridges: A:R.47, A:R.47, A:K.53 Salt bridges: A:R.47, A:K.53, B:K.41 Hydrogen bonds: B:T.62 SO4.3: 5 residues within 4Å: Chain A: K.53 Chain B: V.55, G.56, R.57, I.58 4 PLIP interactions: 1 interactions with chain A, 3 interactions with chain B Salt bridges: A:K.53 Hydrogen bonds: B:G.56, B:R.57, B:I.58 SO4.4: 3 residues within 4Å: Chain A: T.62 Chain B: R.47, K.53 7 PLIP interactions: 2 interactions with chain A, 5 interactions with chain B Hydrogen bonds: A:T.62 Salt bridges: A:K.41, B:R.47, B:K.53 Water bridges: B:R.47, B:R.47, B:K.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kulkarni, M.R. et al., Modeling and experimental assessment of a buried Leu-Ile mutation in dengue envelope domain III. Biochem.Biophys.Res.Commun. (2016)

Release Date

2016-02-24

Peptides

Envelope protein E: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

Envelope protein E

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