SMTL ID : 5b7b.1

Crystal structure of Nucleoprotein-nucleozin complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-hexamer

Ligands

2 x NUZ: [4-(2-chloro-4-nitrophenyl)piperazin-1-yl](5-methyl-3-phenyl-1,2-oxazol-4-yl)methanone(Non-covalent)

NUZ.1: 8 residues within 4Å: Chain A: S.287, Y.289, L.306, N.309 Chain B: Q.308, R.382, S.383, R.384 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.289, A:L.306, A:N.309 NUZ.2: 10 residues within 4Å: Chain C: Q.308, R.348, T.350, R.382, R.384 Chain D: S.287, Y.289, R.305, L.306, N.309 6 PLIP interactions: 1 interactions with chain C, 5 interactions with chain D pi-Cation interactions: C:R.382 Hydrophobic interactions: D:Y.289, D:Y.289, D:R.305, D:L.306, D:N.309

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pang, B. et al., Structural Characterization of H1N1 Nucleoprotein-Nucleozin Binding Sites. Sci Rep (2016)

Release Date

2016-07-06

Peptides

Nucleoprotein: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Nucleoprotein

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