SMTL ID : 5b8b.1

Crystal structure of reduced chimeric E.coli AhpC1-186-YFSKHN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-10-mer

Ligands

14 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: C.47, P.48, S.86, E.87, T.88 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.86, A:E.87 SO4.2: 4 residues within 4Å: Chain E: I.22, E.23, I.24, D.28 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:D.28 SO4.3: 5 residues within 4Å: Chain F: P.40, R.112, E.115, E.139 Chain H: F.77 2 PLIP interactions: 2 interactions with chain F Hydrogen bonds: F:R.112, F:E.139 SO4.4: 3 residues within 4Å: Chain F: P.10, E.26, K.27 2 PLIP interactions: 2 interactions with chain F Hydrogen bonds: F:E.26 Salt bridges: F:K.27 SO4.5: 3 residues within 4Å: Chain H: S.86, E.87, T.88 3 PLIP interactions: 3 interactions with chain H Hydrogen bonds: H:S.86, H:E.87, H:T.88 SO4.6: 1 residues within 4Å: Chain H: K.153 1 PLIP interactions: 1 interactions with chain H Salt bridges: H:K.153 SO4.7: 5 residues within 4Å: Chain G: D.144, S.146, D.147, R.150 Chain H: D.144 2 PLIP interactions: 2 interactions with chain H Hydrogen bonds: H:D.144, H:S.146 SO4.8: 2 residues within 4Å: Chain H: T.6, K.7 1 PLIP interactions: 1 interactions with chain H Hydrogen bonds: H:K.7 SO4.9: 4 residues within 4Å: Chain H: K.17, I.22, I.24, Y.69 2 PLIP interactions: 2 interactions with chain H Hydrogen bonds: H:Y.69 Salt bridges: H:K.17 SO4.10: 4 residues within 4Å: Chain I: G.19, E.20, F.21, K.80 1 PLIP interactions: 1 interactions with chain I Salt bridges: I:K.80 SO4.11: 1 residues within 4Å: Chain I: E.30 2 PLIP interactions: 2 interactions with chain I Hydrogen bonds: I:E.30, I:E.30 SO4.12: 3 residues within 4Å: Chain G: F.77 Chain I: P.40, E.139 1 PLIP interactions: 1 interactions with chain I Hydrogen bonds: I:R.112 SO4.13: 4 residues within 4Å: Chain I: P.48, S.86, E.87, T.88 3 PLIP interactions: 3 interactions with chain I Hydrogen bonds: I:E.87, I:T.88, I:T.88 SO4.14: 6 residues within 4Å: Chain C: F.77 Chain J: P.40, T.44, R.112, L.117, E.139 1 PLIP interactions: 1 interactions with chain J Hydrogen bonds: J:R.112

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kamariah, N. et al., Transition steps in peroxide reduction and a molecular switch for peroxide robustness of prokaryotic peroxiredoxins. Sci Rep (2016)

Release Date

2017-02-01

Peptides

Alkyl hydroperoxide reductase subunit C,Peroxiredoxin-2: ABCDEFGHIJ

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
I

D
J

E
C

F
D

G
F

H
E

I
G

J
H

Alkyl hydroperoxide reductase subunit C,Peroxiredoxin-2

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