- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
NAD.2: 27 residues within 4Å:- Chain A: G.35, G.37, G.38, T.39, I.40, D.60, H.61, S.62, N.65, L.85, S.86, I.87, A.108, A.109, A.110, K.112, N.127, I.150, S.151, T.152, K.166, F.188, G.189, N.190, V.191, S.194, S.195
30 PLIP interactions:30 interactions with chain A- Hydrophobic interactions: A:F.188
- Hydrogen bonds: A:G.37, A:T.39, A:T.39, A:T.39, A:I.40, A:H.61, A:S.62, A:N.65, A:I.87, A:A.110, A:K.112, A:N.127, A:N.127, A:K.166, A:V.191, A:S.194, A:S.194, A:S.195
- Water bridges: A:G.38, A:G.41, A:S.62, A:S.62, A:S.86, A:I.150, A:K.166
- Salt bridges: A:K.112, A:K.112
- pi-Stacking: A:H.61, A:H.61
NAD.4: 26 residues within 4Å:- Chain B: G.35, G.37, G.38, T.39, I.40, D.60, H.61, S.62, N.65, L.85, S.86, I.87, A.108, A.109, A.110, K.112, N.127, I.150, S.151, T.152, K.166, F.188, G.189, N.190, V.191, S.194
27 PLIP interactions:27 interactions with chain B- Hydrophobic interactions: B:F.188, B:V.191
- Hydrogen bonds: B:G.37, B:T.39, B:I.40, B:H.61, B:S.62, B:N.65, B:I.87, B:A.110, B:N.127, B:N.127, B:K.166, B:K.166, B:V.191, B:S.194, B:S.194
- Water bridges: B:G.38, B:G.41, B:S.62, B:S.62, B:S.86, B:N.190
- Salt bridges: B:K.112, B:K.112
- pi-Stacking: B:H.61, B:H.61
- 1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Riegert, A.S. et al., Structural and Biochemical Investigation of PglF from Campylobacter jejuni Reveals a New Mechanism for a Member of the Short Chain Dehydrogenase/Reductase Superfamily. Biochemistry (2017)
- Release Date
- 2017-11-08
- Peptides
- WlaL protein: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Riegert, A.S. et al., Structural and Biochemical Investigation of PglF from Campylobacter jejuni Reveals a New Mechanism for a Member of the Short Chain Dehydrogenase/Reductase Superfamily. Biochemistry (2017)
- Release Date
- 2017-11-08
- Peptides
- WlaL protein: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B