SMTL ID : 5bmo.1

LnmX protein, a putative GlcNAc-PI de-N-acetylase from Streptomyces atroolivaceus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.92 Å

Oligo State

homo-trimer

Ligands

3 x K: POTASSIUM ION(Non-covalent)

K.1: 3 residues within 4Å: Chain A: H.24, D.27, H.138 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.24, A:D.27, A:D.27, A:H.138, H2O.5 K.3: 3 residues within 4Å: Chain B: H.24, D.27, H.138 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.24, B:D.27, B:D.27, B:H.138, H2O.9 K.5: 3 residues within 4Å: Chain C: H.24, D.27, H.138 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:H.24, C:D.27, C:D.27, C:H.138, H2O.12

3 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 4 residues within 4Å: Chain A: G.54, G.57, R.70, D.94 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.70 Salt bridges: A:H.24 ACT.4: 3 residues within 4Å: Chain B: G.54, G.57, D.94 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.70 Water bridges: B:D.137 Salt bridges: B:H.24 ACT.6: 3 residues within 4Å: Chain C: G.57, R.70, D.94 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:R.70 Salt bridges: C:H.24

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Osipiuk, J. et al., LnmX protein, a putative GlcNAc-PI de-N-acetylase from Streptomyces atroolivaceus. to be published

Release Date

2015-06-10

Peptides

Putative uncharacterized protein LnmX: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Putative uncharacterized protein LnmX