SMTL ID : 5bni.2 (1 other biounit)

Porcine CD38 complexed with complexed with a covalent intermediate, ribo-F-ribose-5'-phosphate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x AVW: [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl [(2R,3R,4S)-4-fluoro-3-hydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate(Covalent)

AVW.1: 13 residues within 4Å: Chain A: F.76, W.77, S.78, K.79, L.97, R.128, W.140, S.144, F.147, S.171, T.172, F.173, E.177 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:W.77, A:W.77, A:K.79, A:R.128, A:R.128, A:W.140, A:S.144, A:S.171, A:T.172, A:T.172, A:F.173 Water bridges: A:T.170, A:T.172, A:T.172 Salt bridges: A:K.79, A:K.79

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ting, K.Y. et al., Porcine CD38 exhibits prominent secondary NAD(+) cyclase activity. Protein Sci. (2016)

Release Date

2016-05-25

Peptides

Uncharacterized protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Uncharacterized protein

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