SMTL ID : 5bow.2 (1 other biounit)

CRYSTAL STRUCTURE OF IL-38

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.31 Å

Oligo State

homo-dimer

Ligands

12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: W.119, T.134, K.135 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.135, A:K.135 EDO.2: 3 residues within 4Å: Chain A: Q.149, S.150, W.151 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.149 EDO.3: 7 residues within 4Å: Chain A: A.6, Y.8, G.62, I.85, E.86 Chain B: E.86 Ligands: EDO.9 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.8, A:Y.8, A:E.86 EDO.4: 5 residues within 4Å: Chain A: E.74, P.76, S.77, W.119, L.133 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.74, A:L.133 Water bridges: A:T.72, A:L.133 EDO.5: 5 residues within 4Å: Chain A: Y.20, V.28, G.29, P.127, Q.128 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.20, A:Q.128 Water bridges: A:V.28, A:Q.129, A:Q.129 EDO.6: 2 residues within 4Å: Chain A: G.106, S.107 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.107 EDO.7: 3 residues within 4Å: Chain B: W.119, T.134, K.135 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:T.134, B:K.135, B:K.135 EDO.8: 3 residues within 4Å: Chain B: Q.149, S.150, W.151 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.149 EDO.9: 7 residues within 4Å: Chain A: E.86 Chain B: A.6, Y.8, G.62, I.85, E.86 Ligands: EDO.3 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Y.8, B:E.86, B:E.86 EDO.10: 5 residues within 4Å: Chain B: E.74, P.76, S.77, W.119, L.133 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.74, B:L.133 Water bridges: B:L.133 EDO.11: 5 residues within 4Å: Chain B: Y.20, V.28, G.29, P.127, Q.128 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:Y.20, B:Y.20, B:Q.128 Water bridges: B:V.28, B:Q.129, B:Q.129 EDO.12: 2 residues within 4Å: Chain B: G.106, S.107 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guenther, S. et al., Crystal Structure of Interleukin-38. To Be Published

Release Date

2016-06-01

Peptides

Interleukin-1 family member 10: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Interleukin-1 family member 10

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