SMTL ID : 5bp4.7 (8 other biounits)

Modifying region (DH-ER-KR) of a mycocerosic acid synthase-like (MAS-like) PKS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.75 Å

Oligo State

homo-dimer

Ligands

4 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 32 residues within 4Å: Chain A: N.578, F.579, A.580, R.588, L.660, A.661, T.664, S.685, T.687, G.688, G.689, V.690, A.709, G.710, S.711, R.714, S.729, R.730, S.753, I.775, G.776, K.777, V.800, D.801, L.802, A.803, M.849, G.850, G.851, A.852, H.854, K.857 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:T.664 Hydrogen bonds: A:F.579, A:R.588, A:R.588, A:S.685, A:T.687, A:G.689, A:V.690, A:G.710, A:R.714, A:R.714, A:S.729, A:R.730, A:V.800, A:L.802, A:H.854 Salt bridges: A:R.714, A:R.730, A:H.854 pi-Cation interactions: A:R.730 NAP.2: 19 residues within 4Å: Chain A: T.889, G.890, L.892, G.893, G.894, L.895, N.914, S.915, R.916, S.917, G.942, D.943, I.944, A.945, A.970, A.971, A.972, V.973, P.993 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.915, A:R.916, A:S.917, A:S.917, A:D.943, A:I.944, A:A.972 Salt bridges: A:R.916 NAP.3: 30 residues within 4Å: Chain B: N.578, F.579, A.580, R.588, L.660, T.664, S.685, T.687, G.688, G.689, V.690, A.709, G.710, R.714, S.729, R.730, S.753, I.775, G.776, K.777, V.800, D.801, L.802, A.803, M.849, G.850, G.851, A.852, H.854, K.857 18 PLIP interactions: 18 interactions with chain B Hydrogen bonds: B:F.579, B:R.588, B:R.588, B:S.685, B:T.687, B:G.689, B:V.690, B:G.710, B:R.714, B:R.714, B:S.729, B:D.801, B:L.802, B:H.854 Salt bridges: B:R.714, B:R.730, B:H.854 pi-Cation interactions: B:R.730 NAP.4: 18 residues within 4Å: Chain B: G.890, L.892, G.893, G.894, L.895, N.914, S.915, R.916, S.917, G.942, D.943, I.944, A.945, A.970, A.971, A.972, V.973, P.993 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:G.893, B:S.915, B:R.916, B:S.917, B:S.917, B:D.943, B:D.943, B:I.944, B:A.972 Salt bridges: B:R.916

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Herbst, D.A. et al., Mycocerosic acid synthase exemplifies the architecture of reducing polyketide synthases. Nature (2016)

Release Date

2016-03-09

Peptides

Mycocerosic acid synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
M

B
N

Mycocerosic acid synthase

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