SMTL ID : 5bq0.1

Crystal structure of bruton agammaglobulinemia tyrosine kinase complexed with BMS-824171 AKA 6-[(3R)-3-(4-tert-bu tylbenzamido)piperidin-1-yl]-2-{[4-(morpholine-4-carbonyl) phenyl]amino}pyridine-3-carboxamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.57 Å

Oligo State

monomer

Ligands

1 x 4US: 4-(2-chlorophenyl)-7-[(4-methylpiperazin-1-yl)carbonyl]-9H-carbazole-1-carboxamide(Non-covalent)

4US.1: 17 residues within 4Å: Chain A: L.32, G.33, T.34, G.35, V.40, A.52, K.54, T.98, E.99, Y.100, M.101, A.102, N.103, G.104, C.105, E.112, L.152 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.32, A:L.32, A:V.40, A:V.40, A:L.152 Hydrogen bonds: A:T.98, A:E.99, A:M.101, A:M.101 Salt bridges: A:E.112

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 2 residues within 4Å: Chain A: T.27, F.28 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:F.28

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 6 residues within 4Å: Chain A: M.73, V.82, T.98, S.162, D.163, F.164 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.82, A:D.163 Water bridges: A:D.163, A:D.163 EDO.4: 4 residues within 4Å: Chain A: Y.222, E.223, R.224, F.225 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.222, A:R.224 Water bridges: A:Y.222, A:Y.222, A:E.223

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Q. et al., Design and synthesis of carbazole carboxamides as promising inhibitors of Bruton's tyrosine kinase (BTK) and Janus kinase 2 (JAK2). Bioorg.Med.Chem.Lett. (2015)

Release Date

2015-09-23

Peptides

Tyrosine-protein kinase BTK: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase BTK

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