SMTL ID : 5bx1.2 (1 other biounit)

Crystal Structure of PRL-1 complex with compound analogy 3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x 4XA: 3-(5,6-dimethyl-2H-isoindol-2-yl)-N'-[(E)-furan-2-ylmethylidene]benzohydrazide(Non-covalent)

4XA.1: 6 residues within 4Å: Chain A: Y.11, K.12, N.13, M.121, F.129, R.156 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.129, A:F.129, A:R.156 pi-Stacking: A:Y.11 4XA.4: 6 residues within 4Å: Chain B: Y.11, K.12, N.13, M.121, F.129, R.156 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:F.129, B:F.129, B:R.156 pi-Stacking: B:Y.11

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 12 residues within 4Å: Chain A: I.18, C.101, V.102, A.103, G.104, L.105, G.106, R.107, A.108, P.109, R.134, G.136 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:V.102, A:A.103, A:G.104, A:L.105, A:G.106, A:R.107, A:A.108 Water bridges: A:C.101, A:C.101 Salt bridges: A:R.134 SO4.3: 5 residues within 4Å: Chain A: K.122, R.150 Chain B: M.153, R.154, F.157 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain B Salt bridges: A:K.122, A:R.150, B:R.154 Hydrogen bonds: B:R.154 Water bridges: B:R.154 SO4.5: 12 residues within 4Å: Chain B: I.18, C.101, V.102, A.103, G.104, L.105, G.106, R.107, A.108, P.109, R.134, G.136 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:V.102, B:A.103, B:G.104, B:L.105, B:G.106, B:R.107, B:A.108 Water bridges: B:C.101, B:C.101 Salt bridges: B:R.134 SO4.6: 5 residues within 4Å: Chain A: M.153, R.154, F.157 Chain B: K.122, R.150 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:R.154 Water bridges: A:R.154 Salt bridges: A:R.154, B:K.122, B:R.150

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, S. et al., Crystal Structure of PRL-1 complex with compound analogy 3. To Be Published

Release Date

2016-12-21

Peptides

Protein tyrosine phosphatase type IVA 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Protein tyrosine phosphatase type IVA 1

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