SMTL ID : 5bxy.1 (1 other biounit)

Crystal structure of RNA methyltransferase from Salinibacter ruber in complex with S-Adenosyl-L-homocysteine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 19 residues within 4Å: Chain A: V.3, P.4, Y.5, V.6, P.7, T.8, D.30, G.32, S.33, G.34, R.37, I.38, E.54, I.55, L.59, G.81, D.82, L.83, Y.97 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.8, A:G.32, A:G.34, A:I.55, A:D.82, A:L.83

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: R.64, E.77, F.78 Ligand excluded by PLIP CL.3: 2 residues within 4Å: Chain A: R.134, R.145 Ligand excluded by PLIP

1 x MG: MAGNESIUM ION(Non-functional Binders)

MG.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Handing, K.B. et al., Crystal structure of RNA methylase family protein from Salinibacterruber in complex with S-Adenosyl-L-homocysteine. to be published

Release Date

2015-07-01

Peptides

RNA methyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RNA methyltransferase

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