SMTL ID : 5byg.1 (1 other biounit)

X-ray structure of AAV2 OBD-AAVS1 complex 2:1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: E.86, H.95 No protein-ligand interaction detected (PLIP) MG.3: 3 residues within 4Å: Chain B: E.86, H.93, H.95 2 PLIP interactions: 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.95, H2O.2

1 x CIT: CITRIC ACID(Non-functional Binders)

CIT.2: 8 residues within 4Å: Chain A: E.153, P.157, Q.177, Y.178, L.191, Q.194, H.195, H.198 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.178, A:Q.194 Salt bridges: A:H.195, A:H.198

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Musayev, F.N. et al., Structural Insights into the Assembly of the Adeno-associated Virus Type 2 Rep68 Protein on the Integration Site AAVS1. J.Biol.Chem. (2015)

Release Date

2015-09-23

Peptides

Protein Rep78: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protein Rep78

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