SMTL ID : 5bzc.1

Crystal structure of the murine CD44 hyaluronan binding domain complex with a small molecule

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x 4WT: 4,4-dimethyl-1,2,3,4-tetrahydroisoquinoline(Non-covalent)

4WT.1: 7 residues within 4Å: Chain A: N.6, V.7, H.16, E.18, V.130, N.131, R.132 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:N.6 pi-Cation interactions: A:R.132

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 7 residues within 4Å: Chain A: C.9, C.111, T.112, S.113, N.131, R.132, D.133 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.132, A:D.133 Salt bridges: A:D.133

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, L.K. et al., Crystal structure of the murine cd44 hyaluronan binding domain complex with a small molecule. To Be Published

Release Date

2016-06-29

Peptides

CD44 antigen: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CD44 antigen