SMTL ID : 5c0k.1

Fragment-Based Drug Discovery Targeting Inhibitor of Apoptosis Proteins: Compound 3

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.56, C.59, H.76, C.83 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.56, A:C.59, A:H.76, A:C.83

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: F.28, G.29, T.30 Ligands: EDO.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:F.28 EDO.3: 1 residues within 4Å: Ligands: EDO.2 No protein-ligand interaction detected (PLIP)

1 x 4WK: (2S)-1-{[(2S)-1-amino-3-methyl-1-oxobutan-2-yl]amino}-1-oxopropan-2-aminium(Non-covalent)

4WK.4: 9 residues within 4Å: Chain A: G.62, L.63, T.64, D.65, W.66, K.67, E.70, Q.75, W.79 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:W.66 Hydrogen bonds: A:T.64, A:T.64, A:Q.75 Water bridges: A:G.62, A:T.64, A:Q.75, A:Y.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chessari, G. et al., Fragment-Based Drug Discovery Targeting Inhibitor of Apoptosis Proteins: Discovery of a Non-Alanine Lead Series with Dual Activity Against cIAP1 and XIAP. J.Med.Chem. (2015)

Release Date

2015-08-12

Peptides

E3 ubiquitin-protein ligase XIAP: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E3 ubiquitin-protein ligase XIAP

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