SMTL ID : 5c24.1

Crystal Structure of HIV-1 Reverse Transcriptase in Complex with 7-((4-((4-cyanophenyl)amino)-1,3,5-triazin-2-yl)amino)-6,8-dimethylindolizine-2-carbonitrile (JLJ605), a non-nucleoside inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 4XO: 6-({4-[(4-cyanophenyl)amino]-1,3,5-triazin-2-yl}amino)-5,7-dimethylindolizine-2-carbonitrile(Non-covalent)

4XO.1: 14 residues within 4Å: Chain A: L.98, K.99, K.101, V.177, Y.179, Y.186, G.188, F.221, W.223, L.228, H.229, P.230, Y.310 Chain B: E.134 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.98, A:K.101, A:V.177, A:Y.179, A:Y.179, A:Y.179, A:Y.186, A:Y.186, A:L.228, A:Y.310 Hydrogen bonds: A:K.99, A:K.99, A:K.101 pi-Stacking: A:W.223

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: K.71, Y.144, Q.149 No protein-ligand interaction detected (PLIP)

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: K.323, G.325, Q.326, K.504 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.326, A:Q.326 Salt bridges: A:K.323, A:K.504

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, W.G. et al., Discovery and crystallography of bicyclic arylaminoazines as potent inhibitors of HIV-1 reverse transcriptase. Bioorg.Med.Chem.Lett. (2015)

Release Date

2015-07-29

Peptides

HIV-1 REVERSE TRANSCRIPTASE, P66 SUBUNIT: A
HIV-1 REVERSE TRANSCRIPTASE, P51 SUBUNIT: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HIV-1 REVERSE TRANSCRIPTASE, P66 SUBUNIT

HIV-1 REVERSE TRANSCRIPTASE, P51 SUBUNIT