SMTL ID : 5c29.1 (1 other biounit)

PDE10 complexed with 6-chloro-2-cyclopropyl-5-methyl-N-propyl-pyrimidin-4-amine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.102, H.136, D.137, D.247 Ligands: MG.2 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.102, A:H.136, A:D.137, A:D.247, H2O.1, H2O.3

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: D.137, E.165 Ligands: ZN.1 6 PLIP interactions: 1 interactions with chain A, 5 Ligand-Water interactions Metal complexes: A:D.137, H2O.1, H2O.1, H2O.1, H2O.3, H2O.3

1 x 4XY: 6-chloro-2-cyclopropyl-5-methyl-N-propylpyrimidin-4-amine(Non-covalent)

4XY.3: 10 residues within 4Å: Chain A: H.98, L.248, S.250, V.251, I.265, Y.266, F.269, M.286, Q.299, F.302 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.248, A:I.265, A:F.269, A:F.302 Hydrogen bonds: A:Q.299 Water bridges: A:Y.97, A:Y.97 pi-Stacking: A:F.302

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shipe, W.D. et al., Discovery and Optimization of a Series of Pyrimidine-Based Phosphodiesterase 10A (PDE10A) Inhibitors through Fragment Screening, Structure-Based Design, and Parallel Synthesis. J.Med.Chem. (2015)

Release Date

2015-09-30

Peptides

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A

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