SMTL ID : 5c2k.1

Crystal structure of the fusion protein linked by RhoA and the GAP domain of MgcRacGAP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.42 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: T.26, T.44 Ligands: AF3.2, GDP.3 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:T.26, A:T.44, H2O.4, H2O.6

1 x AF3: ALUMINUM FLUORIDE(Non-covalent)

AF3.2: 12 residues within 4Å: Chain A: G.21, A.22, K.25, P.43, T.44, T.67, A.68, G.69, Q.70, R.254 Ligands: MG.1, GDP.3 No protein-ligand interaction detected (PLIP)

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.3: 18 residues within 4Å: Chain A: D.20, A.22, C.23, G.24, K.25, T.26, C.27, F.37, Y.41, K.125, D.127, L.128, S.167, A.168, K.169, R.254 Ligands: MG.1, AF3.2 25 PLIP interactions: 25 interactions with chain A Hydrogen bonds: A:A.22, A:C.23, A:G.24, A:K.25, A:T.26, A:C.27, A:T.44, A:K.125, A:K.125, A:A.168, A:K.169 Water bridges: A:L.28, A:P.38, A:E.39, A:E.39, A:V.40, A:R.254, A:R.254, A:R.254, A:R.254 Salt bridges: A:K.25, A:D.127, A:R.254, A:R.254 pi-Stacking: A:F.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Murayama, K. et al., Structural basis of G-protein target alternation of MgcRacGAP by phospholylation. To Be Published

Release Date

2016-06-22

Peptides

Transforming protein RhoA,Rac GTPase-activating protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transforming protein RhoA,Rac GTPase-activating protein 1