SMTL ID : 5c31.2 (2 other biounits)

Constitutively active Sin recombinase catalytic domain reveals two rotational intermediates

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-tetramer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: R.7, S.9, S.36, R.66, R.69 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.9, A:S.9, A:S.36 Salt bridges: A:R.7, A:R.66, A:R.69 SO4.2: 6 residues within 4Å: Chain B: R.7, S.9, G.37, R.66, R.69, R.125 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:S.9, B:S.9, B:S.9 Salt bridges: B:R.7, B:R.66, B:R.69, B:R.125 SO4.3: 5 residues within 4Å: Chain C: R.7, S.9, Q.13, R.66, R.69 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:S.9, C:S.9, C:S.9 Salt bridges: C:R.7, C:R.66, C:R.69 SO4.4: 6 residues within 4Å: Chain D: R.7, S.9, Q.13, G.37, R.66, R.69 6 PLIP interactions: 6 interactions with chain D Hydrogen bonds: D:S.9, D:S.9, D:Q.13 Salt bridges: D:R.7, D:R.66, D:R.69 SO4.5: 3 residues within 4Å: Chain D: Q.13, N.14, R.17 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:N.14 Water bridges: D:N.14 Salt bridges: D:R.17 SO4.6: 4 residues within 4Å: Chain D: S.10, L.11, D.12, K.34 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:L.11 Salt bridges: D:K.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Trejo, C.S. et al., Snapshots of a molecular swivel in action. Nucleic Acids Res. (2018)

Release Date

2016-12-21

Peptides

Sin, putative plasmid resolvase dimer: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

C
G

D
H

Sin, putative plasmid resolvase dimer

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