SMTL ID : 5c6m.1 (1 other biounit)

Crystal structure of deoxyribose-phosphate aldolase from Shewanella halifaxensis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.76 Å

Oligo State

homo-dimer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 1 residues within 4Å: Chain A: F.76 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:F.76, A:F.76 NA.3: 1 residues within 4Å: Chain B: F.76 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:F.76 Water bridges: B:H.78, B:E.89

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: P.50, R.51 Chain B: R.51 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain A: R.51 Chain B: P.50, R.51 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dick, M. et al., Trading off stability against activity in extremophilic aldolases. Sci Rep (2016)

Release Date

2016-02-03

Peptides

Deoxyribose-phosphate aldolase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Deoxyribose-phosphate aldolase

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