SMTL ID : 5c9c.2 (2 other biounits)

CRYSTAL STRUCTURE OF BRAF(V600E) IN COMPLEX WITH LY3009120 COMPND

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x 4Z5: 1-(3,3-dimethylbutyl)-3-{2-fluoro-4-methyl-5-[7-methyl-2-(methylamino)pyrido[2,3-d]pyrimidin-6-yl]phenyl}urea(Non-covalent)

4Z5.1: 17 residues within 4Å: Chain A: V.52, A.62, K.64, E.82, L.86, L.95, I.108, T.110, Q.111, W.112, C.113, L.148, H.155, F.164, G.174, D.175, F.176 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:V.52, A:A.62, A:L.86, A:L.95, A:I.108, A:T.110, A:L.148, A:L.148 Hydrogen bonds: A:K.64, A:E.82, A:E.82, A:E.82, A:C.113, A:C.113, A:D.175 pi-Stacking: A:F.176, A:F.176

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain A: R.87 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Peng, S.B. et al., Inhibition of RAF Isoforms and Active Dimers by LY3009120 Leads to Anti-tumor Activities in RAS or BRAF Mutant Cancers. Cancer Cell (2015)

Release Date

2015-07-15

Peptides

Serine/threonine-protein kinase B-raf: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Serine/threonine-protein kinase B-raf

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