SMTL ID : 5cd6.4 (4 other biounits)

Crystal structure of a TPR-domain containing protein (BDI_1685) from Parabacteroides distasonis ATCC 8503 at 2.26 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.26 Å

Oligo State

homo-dimer

Ligands

3 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain A: D.212, T.213 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.212, A:T.213 CA.2: 2 residues within 4Å: Chain A: D.286, Q.288 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.286, H2O.4, H2O.15 CA.4: 1 residues within 4Å: Chain B: D.286 4 PLIP interactions: 2 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.286, B:D.286, H2O.26, H2O.32

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 7 residues within 4Å: Chain A: I.99, F.105, H.118, W.269, Y.271, Y.290, E.292 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.290, A:Y.290 Water bridges: A:H.118, A:H.538, A:Q.539, A:Q.539 GOL.5: 7 residues within 4Å: Chain B: I.99, F.105, H.118, W.269, Y.271, Y.290, E.292 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:Y.271, B:Y.290 Water bridges: B:H.118, B:E.292, B:H.538, B:Q.539, B:Q.539

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of a TPR-domain containing protein (BDI_1685) from Parabacteroides distasonis ATCC 8503 at 2.26 A resolution. To be published

Release Date

2015-07-29

Peptides

TPR-domain containing protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

TPR-domain containing protein

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