SMTL ID : 5cey.2 (1 other biounit)

Crystal Structure of Fab 9H+3L, a putative precursor of the PGT121 family of potent HIV-1 antibodies

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.39 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: G.40 Chain B: K.124, G.125, A.127, P.168 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.124

1 x PE7: 1-DEOXY-1-THIO-HEPTAETHYLENE GLYCOL(Non-covalent)

PE7.2: 7 residues within 4Å: Chain B: T.17, R.66, V.68, S.70, S.79, K.81, N.83 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.81, B:N.83

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Garces, F. et al., Affinity Maturation of a Potent Family of HIV Antibodies Is Primarily Focused on Accommodating or Avoiding Glycans. Immunity (2015)

Release Date

2015-12-23

Peptides

Antibody 9H+3L Fab light chain: A
Antibody 9H+3L Fab heavy chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Antibody 9H+3L Fab light chain

Antibody 9H+3L Fab heavy chain

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