SMTL ID : 5cfv.1

Fusion of Maltose-binding Protein and PilA from Acinetobacter nosocomialis M2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 15 residues within 4Å: Chain A: N.13, D.15, K.16, W.63, A.64, D.66, R.67, E.112, E.154, P.155, Y.156, F.157, W.231, M.331, W.341 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:W.63, A:R.67, A:R.67, A:E.154, A:Y.156 Water bridges: A:E.45

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.2: 8 residues within 4Å: Chain A: F.170, I.179, K.180, V.182, Q.336, A.369, A.370, Y.373 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.179, A:V.182, A:A.370, A:Y.373

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 7 residues within 4Å: Chain A: D.96, A.97, Y.177, I.330, M.331, P.332, N.333 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.97, A:N.333 GOL.4: 3 residues within 4Å: Chain A: N.19, E.23, D.297 No protein-ligand interaction detected (PLIP) GOL.5: 5 residues within 4Å: Chain A: Y.168, F.170, K.171, Y.172, E.329 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.172, A:Y.172, A:E.329 Water bridges: A:A.169, A:Y.177

2 x MG: MAGNESIUM ION(Non-covalent)

MG.6: 1 residues within 4Å: Chain A: D.198 No protein-ligand interaction detected (PLIP) MG.7: 1 residues within 4Å: Chain A: D.121 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.121, H2O.4, H2O.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Piepenbrink, K.H. et al., Structural Diversity in the Type IV Pili of Multidrug-resistant Acinetobacter. J.Biol.Chem. (2016)

Release Date

2016-07-13

Peptides

Maltose-binding periplasmic protein,Maltose-binding periplasmic protein,PilA fusion protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Maltose-binding periplasmic protein,Maltose-binding periplasmic protein,PilA fusion protein