SMTL ID : 5chm.1

CRYSTAL STRUCTURE OF Fox-4 cephamycinase complexed with ceftazidime BATSI (LP06)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x CB4: PINACOL[[2-AMINO-ALPHA-(1-CARBOXY-1-METHYLETHOXYIMINO)-4-THIAZOLEACETYL]AMINO]METHANEBORONATE(Covalent)

CB4.1: 11 residues within 4Å: Chain A: G.64, S.65, K.68, Q.121, Y.151, N.153, Y.223, G.317, S.318, T.319, G.320 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:S.65, A:Q.121, A:Y.151, A:N.153, A:S.318, A:S.318, A:S.318, A:G.320 pi-Stacking: A:Y.223

5 x ZN: ZINC ION(Non-covalent)

ZN.2: 1 residues within 4Å: Chain A: H.161 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.161, H2O.3, H2O.7 ZN.3: 1 residues within 4Å: Chain A: H.40 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.40 ZN.4: 4 residues within 4Å: Chain A: E.125, D.127, K.131 Ligands: ACT.8 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:E.125, A:D.127, A:D.127, ACT.8 ZN.5: 1 residues within 4Å: Chain A: H.186 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.186 ZN.6: 2 residues within 4Å: Chain A: H.256, E.309 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.256, H2O.1, H2O.7

1 x NA: SODIUM ION(Non-functional Binders)

NA.7: 1 residues within 4Å: Chain A: E.362 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.362

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.8: 5 residues within 4Å: Chain A: E.125, D.127, S.128, K.131 Ligands: ZN.4 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.131

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lefurgy, S.T. et al., Structures of FOX-4 Cephamycinase in Complex with Transition-State Analog Inhibitors. Biomolecules (2020)

Release Date

2016-08-03

Peptides

Beta-lactamase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-lactamase

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