SMTL ID : 5cpr.1

The novel SUV4-20 inhibitor A-196 verifies a role for epigenetics in genomic integrity

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.22 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.208, C.252, C.254, C.257 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.208, A:C.252, A:C.254, A:C.257

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.2: 18 residues within 4Å: Chain A: H.31, Y.136, S.138, E.139, G.142, A.143, F.183, S.184, A.202, F.203, I.204, N.205, H.206, Y.240, F.245, C.252, E.253, C.254 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:S.138, A:E.139, A:A.143, A:F.183, A:N.205, A:H.206, A:H.206, A:E.253 Water bridges: A:H.31 Salt bridges: A:H.31 pi-Stacking: A:Y.136, A:Y.136, A:F.245

1 x 539: 6,7-dichloro-N-cyclopentyl-4-(pyridin-4-yl)phthalazin-1-amine(Non-covalent)

539.3: 12 residues within 4Å: Chain A: G.162, S.184, V.185, M.186, W.197, A.201, A.202, F.214, V.215, S.216, A.222, Y.240 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:W.197, A:W.197, A:F.214, A:F.214, A:Y.240, A:Y.240 Water bridges: A:S.184, A:S.216 pi-Stacking: A:W.197, A:W.197, A:W.197, A:F.214, A:F.214 Halogen bonds: A:A.222

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bromberg, K.D. et al., The SUV4-20 inhibitor A-196 verifies a role for epigenetics in genomic integrity. Nat. Chem. Biol. (2017)

Release Date

2017-01-25

Peptides

Histone-lysine N-methyltransferase SUV420H1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Histone-lysine N-methyltransferase SUV420H1