SMTL ID : 5cq2.1

Crystal Structure of tandem WW domains of ITCH in complex with TXNIP peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

hetero-4-8-mer

Ligands

72 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.1: 4 residues within 4Å: Chain A: N.27, T.30, I.32 Chain D: R.70 Ligand excluded by PLIP UNX.2: 5 residues within 4Å: Chain A: H.28, N.29, R.31 Chain G: P.11 Ligands: UNX.11 Ligand excluded by PLIP UNX.3: 2 residues within 4Å: Chain A: R.16, T.17 Ligand excluded by PLIP UNX.4: 2 residues within 4Å: Chain A: N.27, N.29 Ligand excluded by PLIP UNX.5: 3 residues within 4Å: Chain A: Q.34 Chain D: R.70 Ligands: UNX.6 Ligand excluded by PLIP UNX.6: 3 residues within 4Å: Chain A: Q.34, P.38 Ligands: UNX.5 Ligand excluded by PLIP UNX.7: 2 residues within 4Å: Chain D: K.47 Ligands: UNX.8 Ligand excluded by PLIP UNX.8: 3 residues within 4Å: Chain A: W.53, R.70 Ligands: UNX.7 Ligand excluded by PLIP UNX.9: 3 residues within 4Å: Chain A: E.51, N.69 Chain D: P.48 Ligand excluded by PLIP UNX.10: 4 residues within 4Å: Chain A: T.58, V.59 Chain C: P.7 Ligands: UNX.15 Ligand excluded by PLIP UNX.11: 6 residues within 4Å: Chain A: R.31 Chain F: E.4 Chain G: L.9, P.10, P.11 Ligands: UNX.2 Ligand excluded by PLIP UNX.12: 1 residues within 4Å: Chain A: I.76 Ligand excluded by PLIP UNX.13: 1 residues within 4Å: Chain A: R.56 Ligand excluded by PLIP UNX.14: 3 residues within 4Å: Chain A: G.21, R.22, V.23 Ligand excluded by PLIP UNX.15: 2 residues within 4Å: Chain C: P.7 Ligands: UNX.10 Ligand excluded by PLIP UNX.16: 2 residues within 4Å: Chain B: D.11 Chain F: D.11 Ligand excluded by PLIP UNX.17: 4 residues within 4Å: Chain C: C.8, Y.9, M.10 Chain E: C.8 Ligand excluded by PLIP UNX.18: 3 residues within 4Å: Chain C: P.3, E.4 Chain J: R.39 Ligand excluded by PLIP UNX.19: 4 residues within 4Å: Chain A: R.70 Chain D: N.27, T.30, I.32 Ligand excluded by PLIP UNX.20: 5 residues within 4Å: Chain D: H.28, N.29, R.31 Chain J: P.11 Ligands: UNX.29 Ligand excluded by PLIP UNX.21: 2 residues within 4Å: Chain D: R.16, T.17 Ligand excluded by PLIP UNX.22: 2 residues within 4Å: Chain D: N.27, N.29 Ligand excluded by PLIP UNX.23: 3 residues within 4Å: Chain A: R.70 Chain D: Q.34 Ligands: UNX.24 Ligand excluded by PLIP UNX.24: 3 residues within 4Å: Chain D: Q.34, P.38 Ligands: UNX.23 Ligand excluded by PLIP UNX.25: 2 residues within 4Å: Chain A: K.47 Ligands: UNX.26 Ligand excluded by PLIP UNX.26: 3 residues within 4Å: Chain D: W.53, R.70 Ligands: UNX.25 Ligand excluded by PLIP UNX.27: 3 residues within 4Å: Chain A: P.48 Chain D: E.51, N.69 Ligand excluded by PLIP UNX.28: 4 residues within 4Å: Chain D: T.58, V.59 Chain F: P.7 Ligands: UNX.33 Ligand excluded by PLIP UNX.29: 6 residues within 4Å: Chain C: E.4 Chain D: R.31 Chain J: L.9, P.10, P.11 Ligands: UNX.20 Ligand excluded by PLIP UNX.30: 1 residues within 4Å: Chain D: I.76 Ligand excluded by PLIP UNX.31: 1 residues within 4Å: Chain D: R.56 Ligand excluded by PLIP UNX.32: 3 residues within 4Å: Chain D: G.21, R.22, V.23 Ligand excluded by PLIP UNX.33: 2 residues within 4Å: Chain F: P.7 Ligands: UNX.28 Ligand excluded by PLIP UNX.34: 2 residues within 4Å: Chain C: D.11 Chain E: D.11 Ligand excluded by PLIP UNX.35: 4 residues within 4Å: Chain B: C.8 Chain F: C.8, Y.9, M.10 Ligand excluded by PLIP UNX.36: 3 residues within 4Å: Chain F: P.3, E.4 Chain G: R.39 Ligand excluded by PLIP UNX.37: 4 residues within 4Å: Chain G: N.27, T.30, I.32 Chain J: R.70 Ligand excluded by PLIP UNX.38: 5 residues within 4Å: Chain A: P.11 Chain G: H.28, N.29, R.31 Ligands: UNX.47 Ligand excluded by PLIP UNX.39: 2 residues within 4Å: Chain G: R.16, T.17 Ligand excluded by PLIP UNX.40: 2 residues within 4Å: Chain G: N.27, N.29 Ligand excluded by PLIP UNX.41: 3 residues within 4Å: Chain G: Q.34 Chain J: R.70 Ligands: UNX.42 Ligand excluded by PLIP UNX.42: 3 residues within 4Å: Chain G: Q.34, P.38 Ligands: UNX.41 Ligand excluded by PLIP UNX.43: 2 residues within 4Å: Chain J: K.47 Ligands: UNX.44 Ligand excluded by PLIP UNX.44: 3 residues within 4Å: Chain G: W.53, R.70 Ligands: UNX.43 Ligand excluded by PLIP UNX.45: 3 residues within 4Å: Chain G: E.51, N.69 Chain J: P.48 Ligand excluded by PLIP UNX.46: 4 residues within 4Å: Chain G: T.58, V.59 Chain I: P.7 Ligands: UNX.51 Ligand excluded by PLIP UNX.47: 6 residues within 4Å: Chain A: L.9, P.10, P.11 Chain G: R.31 Chain L: E.4 Ligands: UNX.38 Ligand excluded by PLIP UNX.48: 1 residues within 4Å: Chain G: I.76 Ligand excluded by PLIP UNX.49: 1 residues within 4Å: Chain G: R.56 Ligand excluded by PLIP UNX.50: 3 residues within 4Å: Chain G: G.21, R.22, V.23 Ligand excluded by PLIP UNX.51: 2 residues within 4Å: Chain I: P.7 Ligands: UNX.46 Ligand excluded by PLIP UNX.52: 2 residues within 4Å: Chain H: D.11 Chain L: D.11 Ligand excluded by PLIP UNX.53: 4 residues within 4Å: Chain I: C.8, Y.9, M.10 Chain K: C.8 Ligand excluded by PLIP UNX.54: 3 residues within 4Å: Chain D: R.39 Chain I: P.3, E.4 Ligand excluded by PLIP UNX.55: 4 residues within 4Å: Chain G: R.70 Chain J: N.27, T.30, I.32 Ligand excluded by PLIP UNX.56: 5 residues within 4Å: Chain D: P.11 Chain J: H.28, N.29, R.31 Ligands: UNX.65 Ligand excluded by PLIP UNX.57: 2 residues within 4Å: Chain J: R.16, T.17 Ligand excluded by PLIP UNX.58: 2 residues within 4Å: Chain J: N.27, N.29 Ligand excluded by PLIP UNX.59: 3 residues within 4Å: Chain G: R.70 Chain J: Q.34 Ligands: UNX.60 Ligand excluded by PLIP UNX.60: 3 residues within 4Å: Chain J: Q.34, P.38 Ligands: UNX.59 Ligand excluded by PLIP UNX.61: 2 residues within 4Å: Chain G: K.47 Ligands: UNX.62 Ligand excluded by PLIP UNX.62: 3 residues within 4Å: Chain J: W.53, R.70 Ligands: UNX.61 Ligand excluded by PLIP UNX.63: 3 residues within 4Å: Chain G: P.48 Chain J: E.51, N.69 Ligand excluded by PLIP UNX.64: 4 residues within 4Å: Chain J: T.58, V.59 Chain L: P.7 Ligands: UNX.69 Ligand excluded by PLIP UNX.65: 6 residues within 4Å: Chain D: L.9, P.10, P.11 Chain I: E.4 Chain J: R.31 Ligands: UNX.56 Ligand excluded by PLIP UNX.66: 1 residues within 4Å: Chain J: I.76 Ligand excluded by PLIP UNX.67: 1 residues within 4Å: Chain J: R.56 Ligand excluded by PLIP UNX.68: 3 residues within 4Å: Chain J: G.21, R.22, V.23 Ligand excluded by PLIP UNX.69: 2 residues within 4Å: Chain L: P.7 Ligands: UNX.64 Ligand excluded by PLIP UNX.70: 2 residues within 4Å: Chain I: D.11 Chain K: D.11 Ligand excluded by PLIP UNX.71: 4 residues within 4Å: Chain H: C.8 Chain L: C.8, Y.9, M.10 Ligand excluded by PLIP UNX.72: 3 residues within 4Å: Chain A: R.39 Chain L: P.3, E.4 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Y. et al., Structural basis for the regulatory role of the PPxY motifs in the thioredoxin-interacting protein TXNIP. Biochem.J. (2016)

Release Date

2015-09-16

Peptides

E3 ubiquitin-protein ligase Itchy homolog: ADGJ
Thioredoxin-interacting protein: BCEFHIKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
A

G
A

J
A

B
B

C
C

E
B

F
C

H
B

I
C

K
B

L
C

E3 ubiquitin-protein ligase Itchy homolog

Thioredoxin-interacting protein

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