SMTL ID : 5cq4.1

Crystal structure of the bromodomain of bromodomain adjacent to zinc finger domain protein 2B (BAZ2B) in complex with 3'-Hydroxyacetophenone (SGC - Diamond I04-1 fragment screening)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: M.23, I.24, E.27, K.112, T.116 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.27, A:T.116

1 x 53C: 1-(3-hydroxyphenyl)ethanone(Non-covalent)

53C.2: 7 residues within 4Å: Chain A: P.36, F.37, V.41, V.46, Y.49, N.92, I.98 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.37, A:V.41, A:I.98 Hydrogen bonds: A:N.92

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: E.93, S.96 Ligands: SO4.4 Ligand excluded by PLIP

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 4 residues within 4Å: Chain A: F.91, N.92, E.93 Ligands: CL.3 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:F.91, A:E.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bradley, A. et al., Crystal structure of the second bromodomain of bromodomain adjancent to zinc finger domain protein 2B (BAZ2B) in complex with 3'-Hydroxyacetophenone (SGC - Diamond I04-1 fragment screening). To be published

Release Date

2015-09-09

Peptides

Bromodomain adjacent to zinc finger domain protein 2B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain adjacent to zinc finger domain protein 2B

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