SMTL ID : 5cq5.1

Crystal structure of the bromodomain of bromodomain adjacent to zinc finger domain protein 2B (BAZ2B) in complex with 2,3-Ethylenedioxybenzoic Acid (SGC - Diamond I04-1 fragment screening)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

monomer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: L.20, M.23, E.27, K.112, T.116 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.112, A:T.116 EDO.2: 3 residues within 4Å: Chain A: F.91, N.92, I.98 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.92

2 x 53E: 2,3-dihydro-1,4-benzodioxine-5-carboxylic acid(Non-covalent)

53E.3: 2 residues within 4Å: Chain A: E.93, D.94 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.94, A:D.94 Water bridges: A:D.95 53E.4: 5 residues within 4Å: Chain A: L.74, E.75, R.82, W.113, F.117 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.74, A:E.75 Salt bridges: A:R.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bradley, A. et al., Crystal structure of the second bromodomain of bromodomain adjancent to zinc finger domain protein 2B (BAZ2B) in complex with 2,3-Ethylenedioxybenzoic Acid (SGC - Diamond I04-1 fragment screening). To be published

Release Date

2015-09-09

Peptides

Bromodomain adjacent to zinc finger domain protein 2B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain adjacent to zinc finger domain protein 2B

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