SMTL ID : 5cq6.1

Crystal structure of the bromodomain of bromodomain adjacent to zinc finger domain protein 2B (BAZ2B) in complex with 2,6-Pyridinedicarboxylic acid (SGC - Diamond I04-1 fragment screening)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.97 Å

Oligo State

monomer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: M.23, E.27, T.116 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.112 EDO.2: 5 residues within 4Å: Chain A: V.41, Y.49, F.91, N.92, I.98 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.92 Water bridges: A:N.92

2 x PDC: PYRIDINE-2,6-DICARBOXYLIC ACID(Non-covalent)

PDC.3: 3 residues within 4Å: Chain A: L.43, K.44, K.50 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:K.44 Salt bridges: A:K.44, A:K.50, A:K.50 PDC.4: 1 residues within 4Å: Chain A: K.51 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.51, A:K.51

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bradley, A. et al., Crystal structure of the second bromodomain of bromodomain adjancent to zinc finger domain protein 2B (BAZ2B) in complex with 2,6-Pyridinedicarboxylic acid (SGC - Diamond I04-1 fragment screening). To be published

Release Date

2015-09-09

Peptides

Bromodomain adjacent to zinc finger domain protein 2B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain adjacent to zinc finger domain protein 2B

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