SMTL ID : 5cqe.1

2.1 Angstrom resolution crystal structure of matrix protein 1 (M1; residues 1-164) from Influenza A virus (A/Puerto Rico/8/34(H1N1))

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: K.71, R.102, F.103 Chain B: Q.99 Ligand excluded by PLIP CL.2: 4 residues within 4Å: Chain A: Q.99 Chain B: K.71, R.102, F.103 Ligand excluded by PLIP CL.5: 3 residues within 4Å: Chain A: R.125 Chain B: D.113, N.115 Ligand excluded by PLIP

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.3: 3 residues within 4Å: Chain A: F.56, T.91, T.164 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:F.56

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 5 residues within 4Å: Chain A: G.97, L.98, Q.99, R.101 Ligands: PEG.6 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.99, A:R.101 Water bridges: A:R.101

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.6: 6 residues within 4Å: Chain A: Q.99 Chain B: E.64, L.98, Q.99, R.101 Ligands: EDO.4 6 PLIP interactions: 2 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:Q.99, B:E.64, B:Q.99, B:R.101, B:R.101 Water bridges: A:R.101

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Halavaty, A.S. et al., 2.1 Angstrom resolution crystal structure of matrix protein 1 (M1; residues 1-164) from Influenza A virus (A/Puerto Rico/8/34(H1N1)). To Be Published

Release Date

2015-08-05

Peptides

Matrix protein 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Matrix protein 1