SMTL ID : 5cqv.1

Crystal structure of uncharacterized protein Q8DWV2 from Streptococcus agalactiae

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 8 residues within 4Å: Chain A: T.14, I.162, A.166, P.167, T.170 Chain B: Y.157, K.158, H.161 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:I.162, A:A.166, B:K.158 Hydrogen bonds: B:K.158

1 x MRD: (4R)-2-METHYLPENTANE-2,4-DIOL(Non-functional Binders)

MRD.2: 9 residues within 4Å: Chain A: Y.157, K.158, H.161, I.162 Chain B: T.14, I.162, A.166, P.167, T.170 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:I.162, B:A.166, B:P.167 Hydrogen bonds: B:T.14, B:T.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Taylor, J.D. et al., Structures of the DfsB Protein Family Suggest a Cationic, Helical Sibling Lethal Factor Peptide. J.Mol.Biol. (2016)

Release Date

2016-02-03

Peptides

Uncharacterized protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Uncharacterized protein