SMTL ID : 5csd.3 (3 other biounits)

Ligand binding domain 2 of Penicillium marneffei MP1 protein in complex with arachidonic acids

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: I.47, L.51, Q.111, E.114, A.115, K.118 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.111, A:A.115, A:K.118

1 x ACD: ARACHIDONIC ACID(Non-covalent)

ACD.2: 17 residues within 4Å: Chain A: F.10, V.13, I.14, L.46, T.50, L.63, A.68, L.71, V.75, L.78, I.82, Q.112, A.116, L.119, V.123, I.142, I.146 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:F.10, A:V.13, A:I.14, A:T.50, A:L.63, A:L.71, A:L.71, A:V.75, A:L.78, A:I.82, A:A.116, A:L.119, A:V.123, A:V.123 Hydrogen bonds: A:T.50, A:T.50, A:Q.112

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sze, K.H. et al., Talaromyces marneffei Mp1p Is a Virulence Factor that Binds and Sequesters a Key Proinflammatory Lipid to Dampen Host Innate Immune Response. Cell Chem Biol (2017)

Release Date

2016-07-27

Peptides

Envelope glycoprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Envelope glycoprotein

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