SMTL ID : 5cwf.1 (3 other biounits)

Crystal structure of de novo designed helical repeat protein DHR8

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

8 x CA: CALCIUM ION(Non-covalent)

CA.1: 1 residues within 4Å: Chain A: D.25 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.25 CA.2: 1 residues within 4Å: Chain A: N.22 No protein-ligand interaction detected (PLIP) CA.3: 1 residues within 4Å: Chain A: R.88 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:R.88, H2O.2, H2O.2, H2O.3 CA.4: 2 residues within 4Å: Chain A: D.24, D.70 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.24, A:D.24, A:D.70, H2O.3, H2O.4 CA.5: 2 residues within 4Å: Chain A: E.172, E.175 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.172, A:E.172, A:E.175 CA.6: 2 residues within 4Å: Chain A: D.160, E.161 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.160, A:E.161, A:E.161, H2O.4 CA.7: 1 residues within 4Å: Chain A: D.93 No protein-ligand interaction detected (PLIP) CA.8: 3 residues within 4Å: Chain A: N.67, N.68, N.113 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:N.67, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brunette, T.J. et al., Exploring the repeat protein universe through computational protein design. Nature (2015)

Release Date

2015-12-16

Peptides

Designed helical repeat protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Designed helical repeat protein

Related Entries With Identical Sequence