SMTL ID : 5cy4.2 (2 other biounits)

Crystal structure of an oligoribonuclease from Acinetobacter baumannii

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-dimer

Ligands

5 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: D.21, N.116, D.121 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:N.116, A:D.121, H2O.1, H2O.1, H2O.3 CA.2: 3 residues within 4Å: Chain A: D.21, L.22, E.23 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.21, A:L.22, A:E.23, H2O.1, H2O.1 CA.3: 3 residues within 4Å: Chain B: D.21, L.22, E.23 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.21, B:D.21, B:L.22, B:E.23, H2O.6 CA.4: 3 residues within 4Å: Chain B: D.21, N.116, D.121 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:N.116, B:D.121, H2O.5, H2O.5, H2O.7 CA.5: 4 residues within 4Å: Chain B: L.46, N.47, V.48, K.181 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lukacs, C.M. et al., Crystal structure of an oligoribonuclease from Acinetobacter baumannii. To Be Published

Release Date

2015-08-19

Peptides

Oligoribonuclease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Oligoribonuclease

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